Income Tax vs GST: Understanding Australia's Tax Landscape
Cutting Through the Confusion Between Income Tax and GST for Australian Small Business Owners

Have you ever sat down with your quarterly tax statements spread across your kitchen table and felt your stomach drop? Yeah, me too. Most of my small business clients in Capalaba tell me the same thing. Last month, I was having coffee with a florist—Sarah's her name—who was practically in tears over a letter from the ATO. "I just wanted to arrange flowers," she sighed, "not become a tax expert overnight."
That's the reality for many Australian business owners. You're experts in your field, not necessarily in taxation. So let's break down these two fundamental pillars of Australia's tax system in a way that actually makes sense.
The Tale of Two Taxes: Understanding the Basics
Income tax and GST might seem like cousins in the tax family, but they're actually quite different beasts with separate appetites and behaviors.
Income tax is essentially the government's share of your profits. It's calculated on your net income after you've deducted allowable expenses. Think of it as paying rent to Australia for the privilege of making money here.
GST, on the other hand, is a consumption tax—a 10% fee added to most goods and services sold in Australia. As a business, you're essentially collecting this tax from your customers on behalf of the government.
A business accountant once explained it to me like this: "Income tax is about what you keep, while GST is about what you pass through."
Income Tax: Your Business's Personal Contribution
When Sarah from the florist shop sells $100,000 worth of beautiful arrangements annually and spends $60,000 on flowers, rent, and other legitimate business expenses, her taxable income is $40,000. Depending on her business structure (sole trader, company, etc.), she'll pay a percentage of this amount as income tax.
For small business accountants, this is where the magic happens—finding legitimate deductions that reduce your taxable income. Everything from office supplies to professional development courses and even certain travel expenses might be deductible.
But here's where many business owners in places like Capalaba go wrong: mixing personal and business expenses. That coffee you grabbed on the way to a client meeting? Potentially deductible. The one you bought while running personal errands? Not so much.
The tax office isn't stupid, folks. They've been around the block. When they see a tradie claiming a $90,000 boat as a "business expense" while reporting just $40,000 in profit, alarm bells ring. It's like turning up to a job interview in pajamas—you're asking for trouble.
GST: The Money That Was Never Really Yours
Let's get into GST. It kicks in once your business hits that $75K yearly turnover mark (or $150K for non-profits). Here's the thing most people miss: GST isn't your money. Never was.
Here's where it gets interesting. Let's say you sell a beautiful custom bookshelf for $1,100. Embedded in that price is $100 of GST. That $100 was never actually your money—you're just temporarily holding it for the government.
Similarly, when you purchase materials from your supplier for $550 (including $50 GST), you can claim that $50 back. This is what accountants call an "input tax credit."
When your BAS quarter ends, you're basically doing a simple math problem. GST collected minus GST paid equals what you owe (or what you'll get back). Sounds straightforward on paper, right? But for the busy café owner in Brisbane or the tradesperson rushing between jobs in Capalaba, these calculations become just one more thing on an already overflowing plate.
This is exactly why my phone rings off the hook at quarter-end. A decent business accountant will set up systems that track this stuff automatically. Trust me, that quarterly headache isn't worth saving a few bucks on accounting fees.
The Secret Connection: Timing and Cash Flow
One aspect that trips up even experienced business owners is the different timing requirements for income tax and GST.
Income tax is assessed annually, based on your financial year results (July 1 to June 30 in Australia, unless you have a substituted accounting period). You then pay this tax either in a lump sum or through quarterly PAYG installments.
GST, meanwhile, is typically reported and paid quarterly, though some businesses opt for monthly or annual reporting. This difference in timing can create cash flow challenges if not managed properly.
I once worked with a tradie in Capalaba who had a fantastic year business-wise but found himself in hot water because he'd spent all his income (including the GST component) without setting aside money for his tax obligations. By the time his BAS statement was due, he had to scramble to find funds to pay his GST liability.
The lesson? Always separate your GST from your operational funds. Many business accountants recommend maintaining a separate bank account specifically for tax obligations, transferring the appropriate percentage of each sale immediately.
When These Taxes Collide: Common Misconceptions
"Hang on," clients often interrupt me, "I'm getting double-taxed here! I paid GST and now income tax on the same money?" I get it. The confusion makes sense, but it's not quite right.
Look at it this way: When you sell something for $1,100, only $1,000 is actually yours (the other $100 is GST that was always the government's money). If your costs were $600 to make that sale, you've pocketed $400 in profit. That's the only bit you pay income tax on.
I had a client—runs a small construction business—who got this wrong for years. He'd been accidentally calculating his income tax on revenue that included GST. When we fixed it, his tax bill dropped by thousands. He nearly hugged me during our meeting at the Capalaba office.
Another common misconception concerns deductions. Just because something is a GST-free purchase doesn't mean it's not deductible for income tax purposes, and vice versa. The rules for GST credits and income tax deductions don't always align perfectly.
Finding Your Path Through the Tax Jungle
For small business owners, particularly in areas like Capalaba where there's a strong entrepreneurial spirit, understanding these tax obligations isn't just about compliance—it's about survival and growth.
I've seen too many promising businesses falter not because their product or service wasn't excellent, but because they mismanaged their tax obligations. On the flip side, I've witnessed businesses flourish when they mastered these fundamentals and used them strategically.
Take inventory management, for example. Timing your major purchases before the end of the financial year can significantly impact both your GST position and your income tax liability. This isn't about gaming the system—it's about understanding the rules and planning accordingly.
Similarly, the timing of invoicing can shift income between financial years, potentially spreading your tax burden more evenly. These are the strategies that experienced business accountants bring to the table, turning tax compliance from a burden into a business advantage.
When Do You Need Professional Help?
While basic tax compliance might seem manageable, the intersection of income tax and GST can become complicated quickly. Here are some signs it's time to consult a small business accountant:
- Your turnover is approaching or has exceeded the GST registration threshold
- You're uncertain about which expenses qualify for GST credits
- You're struggling to keep up with BAS lodgments
- Your business structure is changing
- You're planning a major asset purchase or sale
- You're drowning in ATO payment plans or constantly surprised by your tax bills
Remember this: A half-decent accountant pays for themselves. The bloke who cuts corners to save $500 on accounting fees often ends up with an extra $5,000 tax bill and a stress-induced ulcer. I've seen it happen too many times.
Final Thoughts: Beyond Compliance
When you boil it down, getting your head around income tax and GST isn't just about ticking boxes for the tax office. It's about sleeping better at night. It's about knowing exactly where you stand so you can make smart calls about pricing, purchasing, and planning.
What's the point of working yourself to the bone in your business if the tax office is taking more than their fair share? With the right approach, you can focus on what you actually started your business to do—whether that's building things, healing people, or in Sarah's case, creating beautiful flower arrangements that brighten people's days.
About the Creator
Dan Toombs
Providing strategic support for legal, financial, and healthcare sectors through evidence-based planning and smart execution — built to meet what’s next.



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